Multipoint molecular recognition within a calix[6]arene funnel complex
نویسندگان
چکیده
منابع مشابه
Molecular recognition and self-assembly special feature: Multipoint molecular recognition within a calix[6]arene funnel complex.
A multipoint recognition system based on a calix[6]arene is described. The calixarene core is decorated on alternating aromatic subunits by 3 imidazole arms at the small rim and 3 aniline groups at the large rim. This substitution pattern projects the aniline nitrogens toward each other when Zn(II) binds at the Tris-imidazole site or when a proton binds at an aniline. The XRD structure of the m...
متن کاملMolecular recognition in a heteromolecular radical pair system with complementary multipoint hydrogen-bonding.
Stable radicals 2-(6-uradinyl)-4,4,5,5-tetramethyl-4,5-dihydro-1H-imidazole-1-oxyl (Ur6IN) and 4-(p-tert-butylaminoxylphenyl)-2,6-di(propylamido)pyridine (DAPPN) form heterospin radical pair complexes due to complementary multi-point hydrogen-bonds.
متن کاملSpeeding molecular recognition by using the folding funnel: the fly-casting mechanism.
Protein folding and binding are kindred processes. Many proteins in the cell are unfolded, so folding and function are coupled. This paper investigates how binding kinetics is influenced by the folding of a protein. We find that a relatively unstructured protein molecule can have a greater capture radius for a specific binding site than the folded state with its restricted conformational freedo...
متن کاملDynamics and recognition within a protein–DNA complex: a molecular dynamics study of the SKN-1/DNA interaction
Molecular dynamics simulations of the Caenorhabditis elegans transcription factor SKN-1 bound to its cognate DNA site show that the protein-DNA interface undergoes significant dynamics on the microsecond timescale. A detailed analysis of the simulation shows that movements of two key arginine side chains between the major groove and the backbone of DNA generate distinct conformational sub-state...
متن کاملMolecular recognition in the HIV-1 capsid/cyclophilin A complex.
The HIV-1 capsid protein (CA) makes an essential interaction with the human peptidyl prolyl isomerase, cyclophilin A (CypA), that results in packaging of CypA into the virion at a CA to CypA stoichiometry of approximately 10:1. The 231 amino acid residue capsid protein is composed of an amino-terminal CypA binding domain (1 to approximately 151; CA151) and a carboxyl-terminal dimerization domai...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Proceedings of the National Academy of Sciences
سال: 2009
ISSN: 0027-8424,1091-6490
DOI: 10.1073/pnas.0811663106